CDS

Accession Number TCMCG007C35681
gbkey CDS
Protein Id XP_033128574.1
Location join(3365835..3366101,3366179..3366241,3366324..3366401,3366480..3366962,3367057..3367272,3367408..3367569,3367648..3369139,3369227..3369330,3369410..3369607,3369794..3370063)
Gene LOC103871604
GeneID 103871604
Organism Brassica rapa

Protein

Length 1110aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033272683.1
Definition putative lysine-specific demethylase JMJ16 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description SNF2 family N-terminal domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K10779        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000775        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000792        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0001674        [VIEW IN EMBL-EBI]
GO:0001932        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005700        [VIEW IN EMBL-EBI]
GO:0005701        [VIEW IN EMBL-EBI]
GO:0005721        [VIEW IN EMBL-EBI]
GO:0005722        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006323        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006333        [VIEW IN EMBL-EBI]
GO:0006334        [VIEW IN EMBL-EBI]
GO:0006336        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006915        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006935        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0007409        [VIEW IN EMBL-EBI]
GO:0007411        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008219        [VIEW IN EMBL-EBI]
GO:0008347        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010369        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0012501        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016477        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022008        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030030        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030182        [VIEW IN EMBL-EBI]
GO:0031175        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031497        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032872        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032990        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0034401        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034724        [VIEW IN EMBL-EBI]
GO:0034728        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042063        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042325        [VIEW IN EMBL-EBI]
GO:0042330        [VIEW IN EMBL-EBI]
GO:0042393        [VIEW IN EMBL-EBI]
GO:0042585        [VIEW IN EMBL-EBI]
GO:0043007        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043408        [VIEW IN EMBL-EBI]
GO:0043570        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046328        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048666        [VIEW IN EMBL-EBI]
GO:0048667        [VIEW IN EMBL-EBI]
GO:0048699        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048812        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048858        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0048870        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051674        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061564        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070302        [VIEW IN EMBL-EBI]
GO:0070828        [VIEW IN EMBL-EBI]
GO:0070868        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097190        [VIEW IN EMBL-EBI]
GO:0097193        [VIEW IN EMBL-EBI]
GO:0097485        [VIEW IN EMBL-EBI]
GO:0097549        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:0120036        [VIEW IN EMBL-EBI]
GO:0120039        [VIEW IN EMBL-EBI]
GO:1900049        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGACAGAGCTAATGAGAGTCTGTATGAAAGAAGAGAGTGATGAGTTACCATCTGTTCCTCCTGGCTTTGAATCATATGCTACTTTCACTTTAAAAAGACCACTCCCTAGTGCTGCTGCTGCTGATAAAACCATGGAAAGTTCTGTAACCGAACAAGCTAATAAGATGGAGGAGATTGAATCCGATGAACTCAAAGCTGCTCGGTCTCTACGGCGTAGACCTTGGATCAACTATGACAATGCATCTCCTCAAAATCTTGATCAAAAGAAGCCTTCTCTACCAAAGGGTGTGACCCGGGGATGTGCAGACTGTAATGACTGCCAGAAGGTAACTGCGAGGTGGCATCCAGATGAAGCTCGTAGGCCCGACCTTGAAGACGCCCCTATATTCTACCCAACCGAAGAGGAGTTTGAAGACACTCTGAGTTATATTTCTAAAATAAGACCAAAGGCTGAAAAGTATGGCATCTGCCGCATTGTTCCTCCTCCTTCCTGGAAACCCCCTTGCCCGCTGAAAGAAAAGCAACTATGGGAAGGCTCTAAATTCACCACACGTGTCCAAAGAGTGGATAAGCTTCAGAACCGGAGCTCAATGAAGAAGATTCTTTCTAATCAGATGAGAAGGAAGAAAAGAAAGTGCATGAAAACGGGAGTGGATGCTGTCACTAACGGCAATGCAAGCACAGAAACGAGTGGATTTGAGACGTTTGGGTTTGAGCCTGGTCCAGGGTTCACTCTAAACGACTTCAAAAAGTATGCTGATGAGTTCAAGGCCCAGTACTTTAAAAAGAGTGAAACTTCTTCTGTTGGTAACTCCTGGGAGCCAGGTGTTGAGGATGTTGAAGGTGAATATTGGCGTATAGTAGATAAAGCAACTGAAGAGATAGAGGTGCTATATGGTGCTGACCTTGAAACTGGAGTATTTGGTAGCGGATTCCCCAAGATATCATCTTCTTCTTCCGACGAAAAATATGCAAAATCGGGATGGAACCTTAATAATTTCTCAAGGCTTCCAGGATCCCTCCTTAAGCACGAGGGCAGTGATATTTCAGGTGTCCTTGTACCGTGGTTGTATATTGGGATGTGCTTTTCTTCTTTCTGCTGGCATGTTGAAGATCACCACTTGTATTCGTTAAATTACATGCACTGGGGTGCACCAAAACTATGGTACGGTGTTTCCGGGAAGGACGCTGTTAAACTCGAGGAGGCGATGAGAAAGCATTTGCCTGACCTTTTCGAAGAACAGCCTGATTTGCTTCATAAGCTAGTAACACAACTCTCCCCATCAAAACTGAAAACGGCAGGAGTACCTGTGCACCGCTGCGTCCAGCACGCTGGAGAGTTTGTCTTGACGTTTCCCCGGGCGTACCACGCTGGATTCAACTGCGGTTTCAACTGTGCTGAAGCTGTGAATGTAGCGCCAGTTGACTGGCTACCTCACGGGCAGATTGCCATTGAGTTATACTGTCAACAGGGTAGAAAAACGTCAATCTCACACGATAAATTGCTGCTTGGGGCTGCAAGAGAAGTAGTGAAAGCCGACTGGGAGCTGAACTTACTGAAGAAAAATACTATTGACAACTTGAGGTGGAAACAGTTCAGCGGAAAGGATGGAGTCTTGGCAAAAACACTCAAGGCACGGATTGACATTGAACGTACGAGAAGAGAGTTTCTTTGCAGCTCTTCGCTTGCATTGAAGATGCATAGTAATTTTGATGCTACCAACGAGAGAGAGTGCTGTATATGCTTCTTTGACTTGCACCTCTCCGCTGCTGGCTGCCGTTGTTCCCCGGAGAAGTATACGTGTTTGACTCATGTGAACCAGCTGTGTTCTTGTCCGTGGGTTAGTAGATATTTTCTGTTTCGGTATGATATCGATGAGCTGAATGTTCTCGTTGAGGCTGTGGAAGGGAAACTTAGTGCTGTGTATAGATGGGCGCGTCAGGACTTAGGATTGGCTTTAAGTGCACACGTGTCAGAAAGAAAGATGGAGATGGATGAAGAAGGGAAAGTGCACAAGGACCTGAGTCCACAAGCAGATGTTAGTTTACTTGTGAAAGACAAGGAGGAGCAATTATCACCAAGCCAGTTTATGAAGCCTGTCAAAGAAGAAACTGTTTCTGTTCCAAAAGATTCAGTTTGCCAACAACCATCTGAAGGAGGCATGATGGTCTCTGTGGCAGCAGCTGCTAAGCCCACTAGTGGTAAAAAGAATTCACGAGGTTCAGTTTCTTCTGGCAAGCATTTGAGAATAATACGAGAAAGACCAACTCACGTTTTAGCGTTGGAAGCAATTGGTAAGCAAGTAACTTCTTTGCCTGATACACGGAACACCATATCATCATTGCCTACTAATGACCAAAGAGAAATGGGAGGGGATGTACCGAGCTCTGTATCGCATACTGAAGTTAATGCTGTAGCTGATGATGATATATGTAATAGAGTGAACATTAGCAACCAACCTAGTAGCAGTAAATCCAAAACCTCTGGAGGTTTGGCTATACTGGATGTGGTTGATGGGACAAGGAGGAGTAAATCAAGTACACCATCTTGTTCGCAAAATAATAATGGGACAGCAAGAAGTAACTCAGGTACACCGACTTGTTCGCAAAACAATAGTCCGGATAGGATCATCCGCCAAAAGGGTCCACGTATAGCAAAAGTTGTGAGGAGAGTCAAATGCAAAGTAGAGCCTTTAAGCTATGGATGTGTGCTCTCTGGAAAATCATGGTGCAACCGTCAAGCAATTTTTCCCAAAGGGTTTCGAAGCCGGGTTAGGTACATAAATATTTTGGATCCAACGAACATGAGCTTTTACGTTTCAGAAATTCTTGATGCTGGACGCAATAGTCCCTTGTTCATGGTTTACTTGGAAGGTAATCCCAGTGAGGTGTTTGCTCACTTGTCGCCTACAAGATGCTGGGAGATGGTGAGAGATAGAGTGAATCAAGAGATAAGTAAGCAACACAAAGCTGGTAGATTAGATCTTCCTCCTCTGCAGCCTTCTGGGAGCCCTGACGGTTTTGAAATGTTTGGATACACGTCACCAGCAATCATACAGGCTATTGAAGCACTAGATGTGAATCGAGTTTGCACAGAGTATTGGGATTCAAGGCCTTATTCGAGGCCACAAGTTCAGTTCCCTGCAAACCCTCTTCCCAGAGAATCCCCCAGACAAGGTCTATTGCCTGCTGGAACAAACTCTACTCTCAAAGTTCTGCTCAAGAAAGCTAACATGGAGGAACTAAGCTCCCTTCAGCAGGTTTTAAGCGAGTCTAACATAGATTTGGTGACAGAACTTGTGAAGGAAGAGATTCAGAATCGCCGCTGA
Protein:  
MGTELMRVCMKEESDELPSVPPGFESYATFTLKRPLPSAAAADKTMESSVTEQANKMEEIESDELKAARSLRRRPWINYDNASPQNLDQKKPSLPKGVTRGCADCNDCQKVTARWHPDEARRPDLEDAPIFYPTEEEFEDTLSYISKIRPKAEKYGICRIVPPPSWKPPCPLKEKQLWEGSKFTTRVQRVDKLQNRSSMKKILSNQMRRKKRKCMKTGVDAVTNGNASTETSGFETFGFEPGPGFTLNDFKKYADEFKAQYFKKSETSSVGNSWEPGVEDVEGEYWRIVDKATEEIEVLYGADLETGVFGSGFPKISSSSSDEKYAKSGWNLNNFSRLPGSLLKHEGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVSGKDAVKLEEAMRKHLPDLFEEQPDLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAAREVVKADWELNLLKKNTIDNLRWKQFSGKDGVLAKTLKARIDIERTRREFLCSSSLALKMHSNFDATNERECCICFFDLHLSAAGCRCSPEKYTCLTHVNQLCSCPWVSRYFLFRYDIDELNVLVEAVEGKLSAVYRWARQDLGLALSAHVSERKMEMDEEGKVHKDLSPQADVSLLVKDKEEQLSPSQFMKPVKEETVSVPKDSVCQQPSEGGMMVSVAAAAKPTSGKKNSRGSVSSGKHLRIIRERPTHVLALEAIGKQVTSLPDTRNTISSLPTNDQREMGGDVPSSVSHTEVNAVADDDICNRVNISNQPSSSKSKTSGGLAILDVVDGTRRSKSSTPSCSQNNNGTARSNSGTPTCSQNNSPDRIIRQKGPRIAKVVRRVKCKVEPLSYGCVLSGKSWCNRQAIFPKGFRSRVRYINILDPTNMSFYVSEILDAGRNSPLFMVYLEGNPSEVFAHLSPTRCWEMVRDRVNQEISKQHKAGRLDLPPLQPSGSPDGFEMFGYTSPAIIQAIEALDVNRVCTEYWDSRPYSRPQVQFPANPLPRESPRQGLLPAGTNSTLKVLLKKANMEELSSLQQVLSESNIDLVTELVKEEIQNRR